DeepDNA

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How to connect

Add it to any MCP client that supports remote servers.

{
  "mcpServers": {
    "deepdna": {
      "type": "http",
      "url": "https://deepdna.ai/mcp"
    }
  }
}

6 tools

• list_genes

  List the genes in the DeepDNA knowledge base, with a one-line summary and category for each.

• lookup_gene

  Everything curated about one gene: function, key variants with rsIDs, metabolizer or function phenotypes, drug interactions, what a consumer genotyping array can and cannot tell you, and sources.

• lookup_variant

  One variant by dbSNP rsID: gene, star-allele or common name, alleles, functional effect, population frequency and sources. Optionally pass the genotype read at that position (e.g. from a raw DNA file) to get how many copies of the variant allele it holds. That count is not a…

• lookup_drug_gene

  Pharmacogenomic guidance for a gene, optionally for one drug: guideline (CPIC or DPWG, "drug label", or null when the record rests on the primary literature), summary of the recommendation, phenotypes and sources. Omit drug to list every drug curated for that gene.

• check_medications

  Given a list of generic drug names, say which ones have a curated drug–gene record, with which genes and what each record rests on (a CPIC or DPWG guideline, a drug label, or the primary literature), and which are not covered. Needs no genotype. Use it before discussing whether…

• request_beta_access

  Register the user's interest in DeepDNA's private beta (DNA file parsing, annotation, bloodwork; not deployed yet). Only call this after the user has explicitly agreed to share their email with DeepDNA for this purpose, and set user_consent to true. Stores the email and the…

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