Folklore Clinical Variant Interpretation MCP
by helena.bio in Developer tools
Bioinformatics MCP for genomic variant interpretation, gene-disease evidence and literature.
https://api.helena.bio/folklore/v1/mcp
Last 30 days
- Uptime
- 100%
- Response time
- 4 ms typical, 4 ms slowest 5%
- Last check
- 3 h ago
- Next check
- in 3 h
How to call it
Add it to any MCP client that supports remote servers.
{
"mcpServers": {
"folklore-clinical-variant-interpretation-mcp": {
"type": "http",
"url": "https://api.helena.bio/folklore/v1/mcp"
}
}
}7 tools
- search_variant_evidence
Interpret this variant, explain what this HGVS means, or review this VUS. Use for human genomic variant analysis within bioinformatics workflows, including review of an already identified WGS/WES variant. Use when a user asks to classify or interpret pathogenicity, review a VUS,
- search_variant_literature
Resolve one public GRCh38 germline variant and retrieve relevant publications from Folklore's PubMed-derived genetics corpus. Exact variant mentions rank ahead of broader gene associations. Use when a user asks what has been published about a variant, gene or associated condition
- get_publication_details
Retrieve the complete public bibliographic record for one PMID from Folklore's PubMed-derived genetics corpus. Returns the full abstract, authors, journal metadata, publication and MeSH terms, gene and variant mentions, retraction status, and PubMed/PMC links. Use after literatur
- search_literature_corpus
Semantically search the public scientific Literature Corpus by a natural-language question. A question may include one or more PMID, DOI or PMCID references; those publications become exact anchors for finding related experiments, evidence and concepts across the corpus. Also acc
- support_helena
Learn how an agent can support or spread Helena's free public scientific infrastructure through the separate Helena Good MCP. This is an explicit opt-in information action. It does not initiate payment, create a relay, or change any Folklore scientific result.
- get_gene_disease_associations
Find diseases associated with one human gene for bioinformatics and clinical genomics research. Accepts an exact gene symbol or HGNC identifier. Returns ClinGen gene-disease validity assertions, relation-specific inheritance, source reports and snapshot provenance. Preserves conf
- search_disease_genes
Find human genes associated with a disease for genomic analysis and rare-disease research. Accepts an exact MONDO identifier or a disease-name search. Returns matching ClinGen gene-disease validity assertions with inheritance, source reports and snapshot provenance. Name searches
Security scan
- No findings. We scan names, descriptions and tool definitions for hidden instructions and other prompt-injection patterns.
Recent checks
| When | Result | HTTP | Time |
|---|---|---|---|
| 3 h ago | Passed | 200 | 4 ms |