90trust / 100

Folklore Clinical Variant Interpretation MCP

by helena.bio in Developer tools

MCP serverPassing, checked 3 h ago

Bioinformatics MCP for genomic variant interpretation, gene-disease evidence and literature.

https://api.helena.bio/folklore/v1/mcp

Last 30 days

All checks passedSome failedAll failedNot checked
Uptime
100%
Response time
4 ms typical, 4 ms slowest 5%
Last check
3 h ago
Next check
in 3 h

How to call it

Add it to any MCP client that supports remote servers.

{
  "mcpServers": {
    "folklore-clinical-variant-interpretation-mcp": {
      "type": "http",
      "url": "https://api.helena.bio/folklore/v1/mcp"
    }
  }
}

7 tools

  • search_variant_evidence

    Interpret this variant, explain what this HGVS means, or review this VUS. Use for human genomic variant analysis within bioinformatics workflows, including review of an already identified WGS/WES variant. Use when a user asks to classify or interpret pathogenicity, review a VUS,

  • search_variant_literature

    Resolve one public GRCh38 germline variant and retrieve relevant publications from Folklore's PubMed-derived genetics corpus. Exact variant mentions rank ahead of broader gene associations. Use when a user asks what has been published about a variant, gene or associated condition

  • get_publication_details

    Retrieve the complete public bibliographic record for one PMID from Folklore's PubMed-derived genetics corpus. Returns the full abstract, authors, journal metadata, publication and MeSH terms, gene and variant mentions, retraction status, and PubMed/PMC links. Use after literatur

  • search_literature_corpus

    Semantically search the public scientific Literature Corpus by a natural-language question. A question may include one or more PMID, DOI or PMCID references; those publications become exact anchors for finding related experiments, evidence and concepts across the corpus. Also acc

  • support_helena

    Learn how an agent can support or spread Helena's free public scientific infrastructure through the separate Helena Good MCP. This is an explicit opt-in information action. It does not initiate payment, create a relay, or change any Folklore scientific result.

  • get_gene_disease_associations

    Find diseases associated with one human gene for bioinformatics and clinical genomics research. Accepts an exact gene symbol or HGNC identifier. Returns ClinGen gene-disease validity assertions, relation-specific inheritance, source reports and snapshot provenance. Preserves conf

  • search_disease_genes

    Find human genes associated with a disease for genomic analysis and rare-disease research. Accepts an exact MONDO identifier or a disease-name search. Returns matching ClinGen gene-disease validity assertions with inheritance, source reports and snapshot provenance. Name searches

Security scan

  • No findings. We scan names, descriptions and tool definitions for hidden instructions and other prompt-injection patterns.

Recent checks

WhenResultHTTPTime
3 h agoPassed2004 ms